International Max Planck Research School - Biological Intelligence

Publications by IMPRS-BI students

Journal Article (53)

2025

Journal Article

Bates, A. S.; Phelps, J. S.; Kim, M.; Yang, H. H.; Matsliah, A.; Ajabi, Z.; Perlman, E.; Delgado, K. M.; Osman, M. A. M.; Salmon, C. K. et al.; Gager, J.; Silverman, B.; Renauld, S.; Collie, M. F.; Fan, J.; Pacheco, D. A.; Zhao, Y.; Patel, J.; Zhang, W.; Capdevilla, L. S.; Roberts, R. J. V.; Munnelly, E. J.; Griggs, N.; Langley, H.; Moya-Llamas, B.; Maloney, R. T.; Yu, S.-c.; Sterling, A. R.; Sorek, M.; Kruk, K.; Serafetinidis, N.; Dhawan, S.; Stürner, T.; Klemm, F.; Brooks, P.; Lesser, E.; Jones, J. M.; Pierce-Lundgren, S. E.; Lee, S.-Y.; Luo, Y.; Cook, A. P.; McKim, T. H.; Kophs, E. C.; Falt, T.; Morales, A. M. N.; Burke, A.; Hebditch, J.; Willie, K. P.; Willie, R.; Popovych, S.; Kemnitz, N.; Ih, D.; Lee, K.; Lu, R.; Halageri, A.; Bae, J. A.; Jourdan, B.; Schwartzman, G.; Demarest, D. D.; Behnke, E.; Bland, D.; Kristiansen, A.; Skelton, J.; Stocks, T.; Garner, D.; Salman, F.; Daly, K. C.; Hernandez, A.; Kumar, S.; Verbe, A.; Nieves-Sanabria, G. A.; Jones, D.; Huang, Z.; Pinto, S.; David, C.; Pablo-Crespo, O. Y. D.; Ye, E.; Huetteroth, W.; Liu, Z.; Santiago, F. J. F.; Dorkenwald, S.; Collman, F.; Suver, M. P.; Fenk, L. M.; Pankratz, M. J.; Jefferis, G. S. X. E.; Eichler, K.; Seeds, A. M.; Hampel, S.; Agrawal, S.; Zandawala, M.; Macrina, T.; Adjavon, D.-Y.; Funke, J.; Tuthill, J. C.; Azevedo, A.; Seung, H. S.; de Bivort, B. L.; Murthy, M.; Drugowitsch, J.; Wilson, R. I.; Lee, W.-C. A.: Distributed control circuits across a brain-and-cord connectome. bioRxiv: the preprint server for biology (2025)

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Beyer, M.; Dudová, P.; Kralj-Fišer, S.; Tuni, C.: The role of among-individual behavioural variation in the mating outcome of the spider Pisaura mirabilis. Behavioral Ecology and Sociobiology 79 (10), 95 (2025)

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Costalunga, G.; Carpena Sanchez, C.; Benichov, J. I.; Cross, C.; Clemens, J.; Vallentin, D.: Attuning to song duels facilitates song-matching in nightingales. bioRxiv: the preprint server for biology (2025)

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da Silva Padilha, M.; Koyuncu, S.; Chabanis, E.; Ryazanov, S.; Leonov, A.; Vilchez, D.; Klein, R.; Giese, A.; Griesinger, C.; Dudanova, I.: Anle138b ameliorates pathological phenotypes in mouse and cellular models of Huntington's disease. bioRxiv: the preprint server for biology (2025)

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Krentz, M.; Tutunji, R.; Kogias, N.; Murali Mahadevan, H.; Reppmann, Z. C.; Krause, F.; Hermans, E. J.: A comparison of fMRI data-derived and physiological data-derived methods for physiological noise correction. bioRxiv: the preprint server for biology (2025)

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Mearns, D. S.; Hunt, S. A.; Schneider, M. W.; Parker, A. V.; Stemmer, M.; Baier, H.: Diverse prey capture strategies in teleost larvae. eLife 13, RP98347 (2025)

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Myoga, M. H.; Amaro, D.; Kello, V.; Gumbert, M.; Leibold, C.; Pecka, M.; Grothe, B.: The dynamics of context-dependent space representations in auditory cortex. bioRxiv: the preprint server for biology (2025)

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Parker, A. V.; Stemmer, M.; Grätsch, S.; Dorigo, A.; Rodriguez Ramirez, O.; Adel, A.; Jordan, L. A.; Baier, H.: Intrinsic timing of brood care in shell-dwelling cichlids. Current Biology 35 (3), pp. 672 - 680 (2025)

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2024

Journal Article

Atluri, N.; Dulko, E.; Jedrusiak, M.; Klos, J.; Osuru, H. P.; Davis, E.; Beenhakker, M.; Kapur, J.; Zuo, Z.; Lunardi, N.: Anatomical substrates of Rapid Eye Movement sleep rebound in a rodent model of post-sevoflurane sleep disruption. Anesthesiology 140 (4), pp. 729 - 741 (2024)

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Bauer, J.; Lewin, U.; Herbert, E.; Gjorgjieva, J.; Schoonover, C.; Fink, A.; Rose, T.; Bonhoeffer, T.; Hübener, M.: Sensory experience steers representational drift in mouse visual cortex. Nature Communications 15, 9153 (2024)

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Del-Valle-Anton, L.; Amin, S.; Cimino, D.; Neuhaus, F.; Dvoretskova, E.; Fernández, V.; Babal, Y. K.; Garcia-Frigola, C.; Prieto-Colomina, A.; Murcia-Ramón, R. et al.; Nomura, Y.; Cárdenas, A.; Feng, C.; Moreno-Bravo, J. A.; Götz, M.; Mayer, C.; Borrell, V.: Multiple parallel cell lineages in the developing mammalian cerebral cortex. Science Advances 10 (13), eadn9998 (2024)

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Ding, W.; Weltzien, H.; Peters, C.; Klein, R.: Nausea-induced suppression of feeding is mediated by central amygdala Dlk1-expressing neurons. Cell Reports 43 (4), 113990 (2024)

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Dvoretskova, E.; Ho, M. C.; Kittke, V.; Neuhaus, F.; Vitali, I.; Lam, D. D.; Delgado, I.; Feng, C.; Torres, M.; Winkelmann, J. et al.; Mayer, C.: Spatial enhancer activation influences inhibitory neuron identity during mouse embryonic development. Nature Neuroscience 27 (5), pp. 862 - 872 (2024)

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Fernholz, M. H. P.; Guggiana Nilo, D.; Bonhoeffer, T.; Kist, A. M.: DeepD3, an open framework for automated quantification of dendritic spines. PLoS Computational Biology 20 (2), e1011774 (2024)

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Hees, J. T.; Wanderoy, S.; Lindner, J.; Helms, M.; Murali Mahadevan, H.; Harbauer, A. B.: Insulin signalling regulates Pink1 mRNA localization via modulation of AMPK activity to support PINK1 function in neurons. Nature Metabolism 6 (3), pp. 514 - 530 (2024)

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Huppertz, M.-C.; Wilhelm, J.; Grenier, V.; Schneider, M. W.; Falt, T.; Porzberg, N.; Hausmann, D.; Hoffmann, D. C.; Hai, L.; Tarnawski, M. et al.; Pino, G.; Slanchev, K.; Kolb, I.; Acuna, C.; Fenk, L. M.; Baier, H.; Hiblot, J.; Johnsson, K.: Recording physiological history of cells with chemical labeling. Science 383 (6685), pp. 890 - 897 (2024)

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Krietsch, J.; Valcu, M.; Cragnolini, M.; Forstmeier, W.; Kempenaers, B.: Mutual mate guarding with limited sexual conflict in a sex-role-reversed shorebird. Behavioral Ecology 35 (1), arad084 (2024)

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Lim, H.; Zhang, Y.; Peters, C.; Straub, T.; Mayer, J. L.; Klein, R.: Genetically- and spatially-defined basolateral amygdala neurons control food consumption and social interaction. Nature Communications 15, 6868 (2024)

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Oefele, M.; Hau, M.; Ruuskanen, S.; Casagrande, S.: Mitochondrial function is enhanced by thyroid hormones during zebra finch development. Royal Society Open Science 11 (7), 240417 (2024)

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Saalfeld, S. T.; Valcu, M.; Brown, S.; English, W.; Giroux, M.-A.; Harrison, A.-L.; Krietsch, J.; Kuletz, K.; Lamarre, J.-F.; Latty, C. et al.; Lecomte, N.; McGuire, R.; Robards, M.; Scarpignato, A.; Schulte, S.; Smith, P. A.; Kempenaers, B.; Lanctot, R. B.: From land to sea: The fall migration of the red phalarope through the Western Hemisphere. Marine Ecology-Progress Series 729, pp. 1 - 29 (2024)

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Sonsalla, G.; Malpartida, A. B.; Riedemann, T.; Gusic, M.; Rusha, E.; Bulli, G.; Najas, S.; Janjic, A.; Hersbach, B. A.; Smialowski, P. et al.; Drukker, M.; Enard, W.; Prehn, J. H. M.; Prokisch, H.; Gotz, M.; Masserdotti, G.: Direct neuronal reprogramming of NDUFS4 patient cells identifies the unfolded protein response as a novel general reprogramming hurdle. Neuron 2 (7), pp. 1117 - 1132 (2024)

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2023

Journal Article

Beyer, M.; Uludag, K. Ö.; Lailler, M.; Mouchet, J. O.; Eberhard, M. J. B.; Czaczkes, T. J.; Tuni, C.: Testing presence of directionality information in female spider silk trails through male trail-following behavior. Behavioral Ecology and Sociobiology 77 (12), 139 (2023)

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Beyer, M.; Uludag, K. Ö.; Tuni, C.: Female state and condition-dependent chemical signaling revealed by male choice of silk trails. Behavioral Ecology 34 (6), pp. 919 - 929 (2023)

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Casagrande, S.; Dzialo, M.; Trost, L.; Malkoc, K.; Sadowska, E. T.; Hau, M.; Pierce, B.; McWilliams, S.; Bauchinger, U.: Mitochondrial metabolism in blood more reliably predicts whole-animal energy needs compared to other tissues. iScience 26 (12), 108321 (2023)

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Casagrande, S.; Loveland, J. L.; Oefele, M.; Boner, W.; Lupi, S.; Stier, A.; Hau, M.: Dietary nucleotides can prevent glucocorticoid-induced telomere attrition in a fast-growing wild vertebrate. Molecular Ecology 32 (19), pp. 5429 - 5447 (2023)

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Chisholm, R. A.; Kristensen, N. P.; Rheindt, F. E.; Chong, K. Y.; Ascher, J. S.; Lim, K. K. P.; Ng, P. K. L.; Yeo, D. C. J.; Meier, R.; Tan, H. H. et al.; Giam, X.; Yeoh, Y. S.; Seah, W. W.; Berman, L. M.; Tan, H. Z.; Sadanandan, K. R.; Theng, M.; Jusoh, W. F. A.; Jain, A.; Huertas, B.; Tan, D. J. X.; Ng, A. C. R.; Teo, A.; Yiwen, Z.; Cho, T. J. Y.; Sin, Y. C. K.: Two centuries of biodiversity discovery and loss in Singapore. Proceedings of the National Academy of Sciences of the United States of America 120 (51), e2309034120 (2023)

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Costalunga, G.; Carpena Sanchez, C.; Seltmann, S.; Benichov, J. I.; Vallentin, D.: Wild nightingales flexibly match whistle pitch in real time. Current Biology 33 (15), pp. 3169 - 3178 (2023)

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Gaona-Gordillo, I.; Holtmann, B.; Mouchet, A.; Hutfluss, A.; Sánchez-Tójar, A.; Dingemanse, N. J.: Are animal personality, body condition, physiology and structural size integrated? A comparison of species, populations and sexes, and the value of study replication. Journal of Animal Ecology 92 (9), pp. 1707 - 1718 (2023)

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Matzke, M.; Rossi, A.; Tuni, C.: Pre- and post-copulatory sexual selection increase offspring quality but impose survival costs to female field crickets. Journal of Evolutionary Biology 36 (1), pp. 296 - 308 (2023)

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Peters, C.; He, S.; Fermani, F.; Lim, H.; Mayer, C.; Klein, R.: Transcriptomics reveals amygdala neuron regulation by fasting and ghrelin thereby promoting feeding. Science Advances 9 (21), eadf6521 (2023)

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publisher-version

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Prüter, H.; Gillingham, M. A. F.; Krietsch, J.; Kuhn, S.; Kempenaers, B.: Sexual transmission may drive pair similarity of the cloacal microbiome in a polyandrous species. Journal of Animal Ecology 92 (8), pp. 1639 - 1657 (2023)

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Sadanandan, K. R.; Ko, M.-C.; Low, G. W.; Gahr, M.; Edwards, S. V.; Hiller, M.; Sackton, T. B.; Rheindt, F. E.; Sin, S. Y. W.; Baldwin, M. W.: Convergence in hearing-related genes between echolocating birds and mammals. Proceedings of the National Academy of Sciences of the United States of America 120 (43), e23073401 (2023)

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Sadanandan, K. R.; Tan, H. Z.; Lim, H. Y.; Tan, Y. G.; Lee, G.; Chan, L.; Pei, Y.; Rheindt, F. E.; Baldwin, M. W.: Spatial and temporal resource partitioning in a mixed-species colony of avian echolocators. Ecology and Evolution 13 (2), e9805 (2023)

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Saha, I.; Yuste-Checa, P.; da Silva Padilha, M.; Guo, Q.; Korner, R.; Holthusen, H.; Trinkaus, V. A.; Dudanova, I.; Fernandez-Busnadiego, R.; Baumeister, W. et al.; Sanders, D. W.; Gautam, S.; Diamond, M. I.; Hartl, F. U.; Hipp, M. S.: The AAA+ chaperone VCP disaggregates Tau fibrils and generates aggregate seeds in a cellular system. Nature Communications 14, 560 (2023)

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Shainer, I.; Kuehn, E.; Laurell, E.; Al Kassar, M.; Mokayes, N.; Sherman, S.; Larsch, J.; Kunst, M.; Baier, H.: A single-cell resolution gene expression atlas of the larval zebrafish brain. Science Advances 9 (8), eade9909 (2023)

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Sherman, S.; Arnold-Ammer, I.; Schneider, M. W.; Kawakami, K.; Baier, H.: Retina-derived signals control pace of neurogenesis in visual brain areas but not circuit assembly. Nature Communications 14, 6020 (2023)

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Tolliver, J. D. M.; Kupan, K.; Lank, D. B.; Schindler, S.; Küpper, C.: Fitness benefits from co-display favour subdominant male-male partnerships between phenotypes. Animal Behaviour 197, pp. 131 - 154 (2023)

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Voelkl, K.; Gutiérrez-Ángel, S.; Keeling, S.; Koyuncu, S.; da Silva Padilha, M.; Feigenbutz, D.; Arzberger, T.; Vilchez, D.; Klein, R.; Dudanova, I.: Neuroprotective effects of hepatoma-derived growth factor in models of Huntington's disease. Life science alliance 6 (11), e202302018 (2023)

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2022

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Groschner, L. N.; Malis, J. G.; Zuidinga, B.; Borst, A.: A biophysical account of multiplication by a single neuron. Nature 603 (7899), pp. 119 - 123 (2022)

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Harbauer, A. B.; Hees, J. T.; Wanderoy, S.; Segura, I.; Gibbs, W.; Cheng, Y.; Ordonez, M.; Cai, Z.; Cartoni, R.; Ashrafi, G. et al.; Wang, C.; Perocchi, F.; He, Z.; Schwarz, T. L.: Neuronal mitochondria transport Pink1 mRNA via synaptojanin 2 to support local mitophagy. Neuron 110 (9), pp. 1516 - 1531.e9 (2022)

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Krietsch, J.; Cragnolini, M.; Kuhn, S.; Lanctot, R. B.; Saalfeld, S. T.; Valcu, M.; Kempenaers, B.: Extrapair paternity in a sequentially polyandrous shorebird: Limited evidence for the sperm storage hypothesis. Animal Behaviour 183, pp. 77 - 92 (2022)

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Liang, Q.; Ko, M.-C.; Ng, N. S. R.; Reh, B.; Lee, J. G. H.; Yamashita, A.; Nishihara, H.; Toda, Y.; Baldwin, M. W.: T1R2-mediated sweet sensing in a lizard. Current Biology 32 (23), pp. R1302 - R1303 (2022)

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Malkoc, K.; Mentesana, L.; Casagrande, S.; Hau, M.: Quantifying glucocorticoid plasticity using reaction norm approaches: There still is so much to discover! Integrative and Comparative Biology 62 (1), pp. 58 - 70 (2022)

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Matzke, M.; Toft, S.; Bechsgaard, J.; Pold Vilstrup, A.; Uhl, G.; Künzel, S.; Tuni, C.; Bilde, T.: Sperm competition intensity affects sperm precedence patterns in a polyandrous gift-giving spider. Molecular Ecology 31 (8), pp. 2435 - 2452 (2022)

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O'Neill, A. C.; Uzbas, F.; Antognolli, G.; Merino, F.; Draganova, K.; Jäck, A.; Zhang, S. R.; Pedini, G.; Schessner, J. P.; Cramer, K. et al.; Schepers, A.; Metzger, F.; Esgleas, M.; Smialowski, P.; Guerrini, R.; Falk, S.; Feederle, R.; Freytag, S.; Wang, Z. F.; Bahlo, M.; Jungmann, R.; Bagni, C.; Borner, G. H. H.; Robertson, S. P.; Hauck, S. M.; Götz, M.: Spatial centrosome proteome of human neural cells uncovers disease-relevant heterogeneity. Science 376 (6599), eabf9088 (2022)

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Strohm, L.; Hu, Z.; Suk, Y.; Rühmkorf, A.; Sternburg, E.; Gattringer, V.; Riemenschneider, H.; Berutti, R.; Graf, E.; Weishaupt, J. H. et al.; Brill, M. S.; Harbauer, A. B.; Dormann, D.; Dengjel, J.; Edbauer, D.; Behrends, C.: Multi-omics profiling identifies a deregulated FUS-MAP1B axis in ALS/FTD-associated UBQLN2 mutants. Life science alliance 5 (11), e202101327 (2022)

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Wanderoy, S.; Rühmkorf, A.; Harbauer, A. B.: Microfluidics-assisted selective depolarization of axonal mitochondria. Journal of Visualized Experiments 186, e64196 (2022)

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2021

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Bauer, J.; Weiler, S.; Fernholz, M. H. P.; Laubender, D.; Scheuss, V.; Hübener, M.; Bonhoeffer, T.; Rose, T.: Limited functional convergence of eye-specific inputs in the retinogeniculate pathway of the mouse. Neuron 109 (15), pp. 2457 - 2468 (2021)

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Beyer, M.; Mangliers, J.; Tuni, C.: Silk-borne chemicals of spider nuptial gifts elicit female gift acceptance. Biology Letters 17 (11), 20210386 (2021)

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Malkoc, K.: Individuelle Anpassungen an wechselnde Umweltbedingungen bei Kohlmeisen: Wie stark reagieren Schilddrüsenhormone auf Temperaturveränderungen und Arbeitsleistung? Vogelwarte - Zeitschrift für Vogelkunde 59 (1), pp. 53 - 54 (2021)

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